Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Gm4804-201ENSMUST00000182234 999 ntBASIC12.64□□□□□ -0.39
Cd40lgP27548 Gm27437-201ENSMUST00000183429 107 ntBASIC12.64□□□□□ -0.39
Cd40lgP27548 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.64□□□□□ -0.39
Cd40lgP27548 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Gm18027-201ENSMUST00000218947 619 ntBASIC12.64□□□□□ -0.39
Cd40lgP27548 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.64□□□□□ -0.39
Cd40lgP27548 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd40lgP27548 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd40lgP27548 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cd40lgP27548 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm14719-201ENSMUST00000121891 340 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm23547-201ENSMUST00000158210 271 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.63□□□□□ -0.39
Cd40lgP27548 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm21470-201ENSMUST00000187680 696 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm7730-201ENSMUST00000212486 454 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.63□□□□□ -0.39
Cd40lgP27548 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.63□□□□□ -0.39
Cd40lgP27548 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd40lgP27548 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.62□□□□□ -0.39
Cd40lgP27548 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Gm15487-201ENSMUST00000122373 465 ntBASIC12.62□□□□□ -0.39
Cd40lgP27548 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms