Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfrsf9P20334 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm5479-201ENSMUST00000160578 435 ntBASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm18377-201ENSMUST00000215141 607 ntBASIC11.28□□□□□ -0.6
Tnfrsf9P20334 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfrsf9P20334 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfrsf9P20334 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Gm6222-201ENSMUST00000120787 396 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Gm12134-201ENSMUST00000122109 520 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Gm13366-201ENSMUST00000122198 970 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 AY702102-202ENSMUST00000194651 1173 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Gm43553-201ENSMUST00000200900 685 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfrsf9P20334 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms