Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccl1P10146 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.58□□□□□ -0.72
Ccl1P10146 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccl1P10146 Gm12882-201ENSMUST00000121696 517 ntBASIC10.58□□□□□ -0.72
Ccl1P10146 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.58□□□□□ -0.72
Ccl1P10146 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ccl1P10146 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Ccl1P10146 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.58□□□□□ -0.72
Ccl1P10146 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.58□□□□□ -0.72
Ccl1P10146 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccl1P10146 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl1P10146 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl1P10146 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.57□□□□□ -0.72
Ccl1P10146 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.57□□□□□ -0.72
Ccl1P10146 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm6550-201ENSMUST00000187574 993 ntBASIC10.57□□□□□ -0.72
Ccl1P10146 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.57□□□□□ -0.72
Ccl1P10146 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl1P10146 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.57□□□□□ -0.72
Ccl1P10146 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl1P10146 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms