Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.36□□□□□ -0.91
Smim1P0C8K7 Gm20472-201ENSMUST00000174403 1240 ntBASIC9.36□□□□□ -0.91
Smim1P0C8K7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.36□□□□□ -0.91
Smim1P0C8K7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC9.36□□□□□ -0.91
Smim1P0C8K7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 AC154471.1-201ENSMUST00000224418 436 ntBASIC9.36□□□□□ -0.91
Smim1P0C8K7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smim1P0C8K7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.35□□□□□ -0.91
Smim1P0C8K7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Daam2-202ENSMUST00000224595 1926 ntBASIC9.35□□□□□ -0.91
Smim1P0C8K7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gm7889-201ENSMUST00000185591 958 ntBASIC9.35□□□□□ -0.91
Smim1P0C8K7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.35□□□□□ -0.91
Smim1P0C8K7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms