Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.31■□□□□ 0.04
Polr2aP08775 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Polr2aP08775 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Polr2aP08775 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Polr2aP08775 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Polr2aP08775 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Polr2aP08775 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.3■□□□□ 0.04
Polr2aP08775 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.3■□□□□ 0.04
Polr2aP08775 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Polr2aP08775 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.3■□□□□ 0.04
Polr2aP08775 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Polr2aP08775 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.29■□□□□ 0.04
Polr2aP08775 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.29■□□□□ 0.04
Polr2aP08775 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Gm18734-201ENSMUST00000172937 808 ntBASIC15.29■□□□□ 0.04
Polr2aP08775 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.29■□□□□ 0.04
Polr2aP08775 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.29■□□□□ 0.04
Polr2aP08775 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.29■□□□□ 0.04
Polr2aP08775 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Polr2aP08775 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.29■□□□□ 0.04
Polr2aP08775 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.29■□□□□ 0.04
Polr2aP08775 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.29■□□□□ 0.04
Polr2aP08775 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Polr2aP08775 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Polr2aP08775 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Polr2aP08775 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.28■□□□□ 0.04
Polr2aP08775 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Polr2aP08775 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Polr2aP08775 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Polr2aP08775 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.28■□□□□ 0.04
Polr2aP08775 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.28■□□□□ 0.04
Polr2aP08775 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.28■□□□□ 0.04
Polr2aP08775 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.28■□□□□ 0.04
Polr2aP08775 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.28■□□□□ 0.04
Polr2aP08775 Gm44551-201ENSMUST00000208804 171 ntBASIC15.28■□□□□ 0.04
Polr2aP08775 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Polr2aP08775 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Polr2aP08775 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Polr2aP08775 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Polr2aP08775 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.28■□□□□ 0.04
Polr2aP08775 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.28■□□□□ 0.04
Polr2aP08775 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Polr2aP08775 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Polr2aP08775 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Polr2aP08775 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Gm13097-201ENSMUST00000210722 397 ntBASIC15.27■□□□□ 0.04
Polr2aP08775 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms