Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Col4a2P08122 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Col4a2P08122 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col4a2P08122 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Gm6447-201ENSMUST00000118905 835 ntBASIC12.47□□□□□ -0.41
Col4a2P08122 Gm11222-201ENSMUST00000119005 738 ntBASIC12.47□□□□□ -0.41
Col4a2P08122 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.47□□□□□ -0.41
Col4a2P08122 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.47□□□□□ -0.41
Col4a2P08122 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a2P08122 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.47□□□□□ -0.41
Col4a2P08122 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.47□□□□□ -0.41
Col4a2P08122 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Col4a2P08122 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.47□□□□□ -0.41
Col4a2P08122 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a2P08122 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col4a2P08122 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.46□□□□□ -0.41
Col4a2P08122 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col4a2P08122 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.46□□□□□ -0.41
Col4a2P08122 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.46□□□□□ -0.41
Col4a2P08122 Gm2231-201ENSMUST00000125661 612 ntBASIC12.46□□□□□ -0.41
Col4a2P08122 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.46□□□□□ -0.41
Col4a2P08122 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Col4a2P08122 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.46□□□□□ -0.41
Col4a2P08122 Gm37042-201ENSMUST00000193816 581 ntBASIC12.46□□□□□ -0.41
Col4a2P08122 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.46□□□□□ -0.41
Col4a2P08122 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.46□□□□□ -0.41
Col4a2P08122 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col4a2P08122 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Col4a2P08122 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Col4a2P08122 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col4a2P08122 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a2P08122 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.46□□□□□ -0.42
Col4a2P08122 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a2P08122 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a2P08122 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.45□□□□□ -0.42
Col4a2P08122 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.45□□□□□ -0.42
Col4a2P08122 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.45□□□□□ -0.42
Col4a2P08122 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col4a2P08122 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Col4a2P08122 Gm11978-201ENSMUST00000122315 466 ntBASIC12.45□□□□□ -0.42
Col4a2P08122 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a2P08122 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a2P08122 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms