Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.75□□□□□ -0.53
H3f3cP02301 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Gm6912-201ENSMUST00000117218 544 ntBASIC11.75□□□□□ -0.53
H3f3cP02301 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.75□□□□□ -0.53
H3f3cP02301 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
H3f3cP02301 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
H3f3cP02301 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
H3f3cP02301 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.75□□□□□ -0.53
H3f3cP02301 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.75□□□□□ -0.53
H3f3cP02301 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.75□□□□□ -0.53
H3f3cP02301 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
H3f3cP02301 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3cP02301 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H3f3cP02301 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H3f3cP02301 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Gm15321-201ENSMUST00000121290 288 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.74□□□□□ -0.53
H3f3cP02301 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.74□□□□□ -0.53
H3f3cP02301 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Gm21854-201ENSMUST00000179901 471 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Gm2445-201ENSMUST00000182798 989 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H3f3cP02301 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 Syt7-204ENSMUST00000223586 1344 ntBASIC11.74□□□□□ -0.53
H3f3cP02301 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H3f3cP02301 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H3f3cP02301 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
H3f3cP02301 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3cP02301 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.73□□□□□ -0.53
H3f3cP02301 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
H3f3cP02301 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms