Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Hbb-b1P02088 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hbb-b1P02088 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Hbb-b1P02088 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Hbb-b1P02088 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Hbb-b1P02088 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.88
Hbb-b1P02088 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.58□□□□□ -0.88
Hbb-b1P02088 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.58□□□□□ -0.88
Hbb-b1P02088 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Gm18489-201ENSMUST00000172565 551 ntBASIC9.58□□□□□ -0.88
Hbb-b1P02088 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.58□□□□□ -0.88
Hbb-b1P02088 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 AC130669.1-201ENSMUST00000228537 1672 ntBASIC9.58□□□□□ -0.88
Hbb-b1P02088 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hbb-b1P02088 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hbb-b1P02088 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hbb-b1P02088 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms