Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gm12151-201ENSMUST00000121374 290 ntBASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Mir7684-201ENSMUST00000183858 60 ntBASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gm5867-201ENSMUST00000063197 592 ntBASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gm15920-201ENSMUST00000118998 402 ntBASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gm27838-201ENSMUST00000184829 128 ntBASIC11.81□□□□□ -0.52
Igh-VJ558P01758 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gm18041-201ENSMUST00000218210 618 ntBASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igh-VJ558P01758 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Gm14719-201ENSMUST00000121891 340 ntBASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igh-VJ558P01758 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms