Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.01□□□□□ -0.49
NgfP01139 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NgfP01139 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NgfP01139 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NgfP01139 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NgfP01139 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NgfP01139 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NgfP01139 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
NgfP01139 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NgfP01139 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12□□□□□ -0.49
NgfP01139 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12□□□□□ -0.49
NgfP01139 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12□□□□□ -0.49
NgfP01139 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
NgfP01139 Gm13123-201ENSMUST00000122173 492 ntBASIC12□□□□□ -0.49
NgfP01139 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
NgfP01139 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12□□□□□ -0.49
NgfP01139 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12□□□□□ -0.49
NgfP01139 Gm7029-201ENSMUST00000173226 450 ntBASIC12□□□□□ -0.49
NgfP01139 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
NgfP01139 Gm42627-201ENSMUST00000197347 224 ntBASIC12□□□□□ -0.49
NgfP01139 Gm44069-201ENSMUST00000204898 506 ntBASIC12□□□□□ -0.49
NgfP01139 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12□□□□□ -0.49
NgfP01139 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12□□□□□ -0.49
NgfP01139 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Gm17383-201ENSMUST00000078739 1041 ntBASIC12□□□□□ -0.49
NgfP01139 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NgfP01139 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12□□□□□ -0.49
NgfP01139 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Gm43598-201ENSMUST00000202482 2479 ntBASIC12□□□□□ -0.49
NgfP01139 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
NgfP01139 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NgfP01139 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NgfP01139 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
NgfP01139 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.99□□□□□ -0.49
NgfP01139 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
NgfP01139 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NgfP01139 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NgfP01139 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.99□□□□□ -0.49
NgfP01139 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Gm25927-201ENSMUST00000175058 117 ntBASIC11.99□□□□□ -0.49
NgfP01139 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.99□□□□□ -0.49
NgfP01139 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.99□□□□□ -0.49
NgfP01139 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.99□□□□□ -0.49
NgfP01139 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.99□□□□□ -0.49
NgfP01139 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
NgfP01139 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.99□□□□□ -0.49
NgfP01139 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NgfP01139 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
NgfP01139 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.99□□□□□ -0.49
NgfP01139 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.99□□□□□ -0.49
NgfP01139 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NgfP01139 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
NgfP01139 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NgfP01139 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms