Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CopeO89079 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
CopeO89079 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.1□□□□□ -0.15
CopeO89079 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.1□□□□□ -0.15
CopeO89079 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.1□□□□□ -0.15
CopeO89079 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.1□□□□□ -0.15
CopeO89079 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.1□□□□□ -0.15
CopeO89079 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CopeO89079 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CopeO89079 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.1□□□□□ -0.15
CopeO89079 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.1□□□□□ -0.15
CopeO89079 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CopeO89079 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CopeO89079 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CopeO89079 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Mir698-201ENSMUST00000102164 109 ntBASIC14.09□□□□□ -0.15
CopeO89079 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CopeO89079 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CopeO89079 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.09□□□□□ -0.15
CopeO89079 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.09□□□□□ -0.15
CopeO89079 Gm13015-201ENSMUST00000118674 204 ntBASIC14.09□□□□□ -0.15
CopeO89079 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.09□□□□□ -0.15
CopeO89079 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.09□□□□□ -0.15
CopeO89079 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.09□□□□□ -0.15
CopeO89079 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CopeO89079 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.09□□□□□ -0.15
CopeO89079 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CopeO89079 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CopeO89079 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CopeO89079 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.09□□□□□ -0.15
CopeO89079 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CopeO89079 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CopeO89079 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CopeO89079 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CopeO89079 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CopeO89079 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CopeO89079 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.08□□□□□ -0.16
CopeO89079 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.08□□□□□ -0.16
CopeO89079 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.08□□□□□ -0.16
CopeO89079 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.08□□□□□ -0.16
CopeO89079 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopeO89079 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms