Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Setdb1O88974 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Setdb1O88974 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Setdb1O88974 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.64■□□□□ 0.25
Setdb1O88974 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Setdb1O88974 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Setdb1O88974 Gm1335-201ENSMUST00000121653 386 ntBASIC16.64■□□□□ 0.25
Setdb1O88974 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Olfr284-202ENSMUST00000206647 966 ntBASIC16.64■□□□□ 0.25
Setdb1O88974 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.64■□□□□ 0.25
Setdb1O88974 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Setdb1O88974 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Setdb1O88974 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Setdb1O88974 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Setdb1O88974 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.63■□□□□ 0.25
Setdb1O88974 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC16.63■□□□□ 0.25
Setdb1O88974 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Gm6334-201ENSMUST00000207083 228 ntBASIC16.63■□□□□ 0.25
Setdb1O88974 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Snora73a-201ENSMUST00000082453 205 ntBASIC16.63■□□□□ 0.25
Setdb1O88974 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Setdb1O88974 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Setdb1O88974 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Setdb1O88974 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.62■□□□□ 0.25
Setdb1O88974 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Setdb1O88974 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.62■□□□□ 0.25
Setdb1O88974 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.62■□□□□ 0.25
Setdb1O88974 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.62■□□□□ 0.25
Setdb1O88974 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Setdb1O88974 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.62■□□□□ 0.25
Setdb1O88974 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.62■□□□□ 0.25
Setdb1O88974 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.62■□□□□ 0.25
Setdb1O88974 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.62■□□□□ 0.25
Setdb1O88974 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.62■□□□□ 0.25
Setdb1O88974 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Setdb1O88974 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Setdb1O88974 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.62■□□□□ 0.25
Setdb1O88974 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Setdb1O88974 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Setdb1O88974 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms