Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Syn1O88935 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.03□□□□□ -0.16
Syn1O88935 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Syn1O88935 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.03□□□□□ -0.16
Syn1O88935 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Gm14017-201ENSMUST00000121934 386 ntBASIC14.03□□□□□ -0.16
Syn1O88935 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Syn1O88935 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Gm5523-201ENSMUST00000180415 997 ntBASIC14.03□□□□□ -0.16
Syn1O88935 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.03□□□□□ -0.16
Syn1O88935 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Gm10146-201ENSMUST00000072739 309 ntBASIC14.03□□□□□ -0.16
Syn1O88935 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.03□□□□□ -0.16
Syn1O88935 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.03□□□□□ -0.16
Syn1O88935 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.03□□□□□ -0.16
Syn1O88935 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Syn1O88935 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syn1O88935 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syn1O88935 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syn1O88935 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Syn1O88935 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syn1O88935 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syn1O88935 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syn1O88935 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.02□□□□□ -0.16
Syn1O88935 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.02□□□□□ -0.16
Syn1O88935 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Syn1O88935 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Syn1O88935 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syn1O88935 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.02□□□□□ -0.17
Syn1O88935 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.02□□□□□ -0.17
Syn1O88935 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.02□□□□□ -0.17
Syn1O88935 Gm5687-201ENSMUST00000118252 640 ntBASIC14.02□□□□□ -0.17
Syn1O88935 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.02□□□□□ -0.17
Syn1O88935 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.02□□□□□ -0.17
Syn1O88935 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.02□□□□□ -0.17
Syn1O88935 Gm6222-202ENSMUST00000182143 629 ntBASIC14.02□□□□□ -0.17
Syn1O88935 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Syn1O88935 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.02□□□□□ -0.17
Syn1O88935 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.02□□□□□ -0.17
Syn1O88935 Gm21769-201ENSMUST00000211922 111 ntBASIC14.02□□□□□ -0.17
Syn1O88935 Gm7046-201ENSMUST00000221351 977 ntBASIC14.02□□□□□ -0.17
Syn1O88935 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.02□□□□□ -0.17
Syn1O88935 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Syn1O88935 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syn1O88935 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.01□□□□□ -0.17
Syn1O88935 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Syn1O88935 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Syn1O88935 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.01□□□□□ -0.17
Syn1O88935 Gm12566-201ENSMUST00000121479 359 ntBASIC14.01□□□□□ -0.17
Syn1O88935 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.01□□□□□ -0.17
Syn1O88935 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Syn1O88935 Gm7029-201ENSMUST00000173226 450 ntBASIC14.01□□□□□ -0.17
Syn1O88935 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Syn1O88935 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.01□□□□□ -0.17
Syn1O88935 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syn1O88935 Gm37922-201ENSMUST00000195596 455 ntBASIC14.01□□□□□ -0.17
Syn1O88935 Gm37497-201ENSMUST00000195830 798 ntBASIC14.01□□□□□ -0.17
Syn1O88935 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms