Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcnkO88874 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcnkO88874 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcnkO88874 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcnkO88874 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcnkO88874 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CcnkO88874 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.19□□□□□ -0.46
CcnkO88874 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CcnkO88874 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.19□□□□□ -0.46
CcnkO88874 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.19□□□□□ -0.46
CcnkO88874 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.19□□□□□ -0.46
CcnkO88874 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
CcnkO88874 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
CcnkO88874 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.19□□□□□ -0.46
CcnkO88874 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CcnkO88874 Gm6736-201ENSMUST00000166583 948 ntBASIC12.19□□□□□ -0.46
CcnkO88874 Gm10275-202ENSMUST00000168697 495 ntBASIC12.19□□□□□ -0.46
CcnkO88874 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Gm43575-201ENSMUST00000196420 516 ntBASIC12.19□□□□□ -0.46
CcnkO88874 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.19□□□□□ -0.46
CcnkO88874 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Gm10275-201ENSMUST00000092620 635 ntBASIC12.19□□□□□ -0.46
CcnkO88874 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CcnkO88874 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CcnkO88874 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CcnkO88874 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CcnkO88874 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CcnkO88874 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.18□□□□□ -0.46
CcnkO88874 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.18□□□□□ -0.46
CcnkO88874 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.18□□□□□ -0.46
CcnkO88874 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CcnkO88874 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.18□□□□□ -0.46
CcnkO88874 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CcnkO88874 Gm2810-201ENSMUST00000118681 990 ntBASIC12.18□□□□□ -0.46
CcnkO88874 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.18□□□□□ -0.46
CcnkO88874 Rprl2-201ENSMUST00000157150 290 ntBASIC12.18□□□□□ -0.46
CcnkO88874 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.18□□□□□ -0.46
CcnkO88874 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.18□□□□□ -0.46
CcnkO88874 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CcnkO88874 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CcnkO88874 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
CcnkO88874 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.17□□□□□ -0.46
CcnkO88874 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
CcnkO88874 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Mir1895-201ENSMUST00000122615 79 ntBASIC12.17□□□□□ -0.46
CcnkO88874 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Gm25911-201ENSMUST00000157621 56 ntBASIC12.17□□□□□ -0.46
CcnkO88874 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.17□□□□□ -0.46
CcnkO88874 Gm10576-201ENSMUST00000191927 825 ntBASIC12.17□□□□□ -0.46
CcnkO88874 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms