Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ttc3O88196 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ttc3O88196 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ttc3O88196 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ttc3O88196 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.2□□□□□ -0.14
Ttc3O88196 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.2□□□□□ -0.14
Ttc3O88196 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.2□□□□□ -0.14
Ttc3O88196 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.2□□□□□ -0.14
Ttc3O88196 Gm7399-201ENSMUST00000032395 858 ntBASIC14.2□□□□□ -0.14
Ttc3O88196 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc3O88196 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ttc3O88196 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ttc3O88196 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ttc3O88196 Gm16202-201ENSMUST00000117532 544 ntBASIC14.19□□□□□ -0.14
Ttc3O88196 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.19□□□□□ -0.14
Ttc3O88196 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.19□□□□□ -0.14
Ttc3O88196 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Gm45930-201ENSMUST00000221330 292 ntBASIC14.19□□□□□ -0.14
Ttc3O88196 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ttc3O88196 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.19□□□□□ -0.14
Ttc3O88196 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ttc3O88196 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.19□□□□□ -0.14
Ttc3O88196 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Ttc3O88196 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc3O88196 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ttc3O88196 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 Gm27572-201ENSMUST00000183702 255 ntBASIC14.18□□□□□ -0.14
Ttc3O88196 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.18□□□□□ -0.14
Ttc3O88196 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.18□□□□□ -0.14
Ttc3O88196 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ttc3O88196 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ttc3O88196 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.18□□□□□ -0.14
Ttc3O88196 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.18□□□□□ -0.14
Ttc3O88196 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.18□□□□□ -0.14
Ttc3O88196 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc3O88196 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ttc3O88196 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms