Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.99□□□□□ -0.01
Trdmt1O55055 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.99□□□□□ -0.01
Trdmt1O55055 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trdmt1O55055 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdmt1O55055 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdmt1O55055 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdmt1O55055 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdmt1O55055 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Gm13350-201ENSMUST00000120519 479 ntBASIC14.98□□□□□ -0.01
Trdmt1O55055 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.98□□□□□ -0.01
Trdmt1O55055 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.98□□□□□ -0.01
Trdmt1O55055 Gm18935-201ENSMUST00000212692 664 ntBASIC14.98□□□□□ -0.01
Trdmt1O55055 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.98□□□□□ -0.01
Trdmt1O55055 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdmt1O55055 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.97□□□□□ -0.01
Trdmt1O55055 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm13342-201ENSMUST00000121055 207 ntBASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm12134-201ENSMUST00000122109 520 ntBASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.97□□□□□ -0.01
Trdmt1O55055 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.97□□□□□ -0.01
Trdmt1O55055 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.97□□□□□ -0.01
Trdmt1O55055 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdmt1O55055 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trdmt1O55055 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trdmt1O55055 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.96□□□□□ -0.01
Trdmt1O55055 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdmt1O55055 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms