Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ChkaO54804 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ChkaO54804 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ChkaO54804 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ChkaO54804 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ChkaO54804 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.83□□□□□ -0.2
ChkaO54804 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.82□□□□□ -0.2
ChkaO54804 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
ChkaO54804 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ChkaO54804 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
ChkaO54804 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.82□□□□□ -0.2
ChkaO54804 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.82□□□□□ -0.2
ChkaO54804 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ChkaO54804 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ChkaO54804 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ChkaO54804 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ChkaO54804 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Gm13385-201ENSMUST00000121089 220 ntBASIC13.81□□□□□ -0.2
ChkaO54804 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.81□□□□□ -0.2
ChkaO54804 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ChkaO54804 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.81□□□□□ -0.2
ChkaO54804 Gm27618-201ENSMUST00000183671 60 ntBASIC13.81□□□□□ -0.2
ChkaO54804 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.81□□□□□ -0.2
ChkaO54804 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ChkaO54804 Gm5867-201ENSMUST00000063197 592 ntBASIC13.81□□□□□ -0.2
ChkaO54804 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.81□□□□□ -0.2
ChkaO54804 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
ChkaO54804 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.81□□□□□ -0.2
ChkaO54804 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ChkaO54804 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ChkaO54804 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.81□□□□□ -0.2
ChkaO54804 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ChkaO54804 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
ChkaO54804 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ChkaO54804 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
ChkaO54804 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ChkaO54804 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.8□□□□□ -0.2
ChkaO54804 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ChkaO54804 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.8□□□□□ -0.2
ChkaO54804 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ChkaO54804 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Gm25144-201ENSMUST00000179561 110 ntBASIC13.8□□□□□ -0.2
ChkaO54804 Gm25352-201ENSMUST00000179815 110 ntBASIC13.8□□□□□ -0.2
ChkaO54804 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ChkaO54804 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ChkaO54804 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ChkaO54804 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ChkaO54804 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms