Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Npc1O35604 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.35□□□□□ -0.27
Npc1O35604 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.35□□□□□ -0.27
Npc1O35604 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Mir698-201ENSMUST00000102164 109 ntBASIC13.35□□□□□ -0.27
Npc1O35604 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.35□□□□□ -0.27
Npc1O35604 Gm18624-201ENSMUST00000220966 658 ntBASIC13.35□□□□□ -0.27
Npc1O35604 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.35□□□□□ -0.27
Npc1O35604 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Npc1O35604 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npc1O35604 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Npc1O35604 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Npc1O35604 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Npc1O35604 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Npc1O35604 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.34□□□□□ -0.27
Npc1O35604 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.34□□□□□ -0.27
Npc1O35604 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Npc1O35604 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Gm9794-201ENSMUST00000202370 423 ntBASIC13.34□□□□□ -0.27
Npc1O35604 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Npc1O35604 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.34□□□□□ -0.27
Npc1O35604 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Npc1O35604 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.34□□□□□ -0.27
Npc1O35604 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.34□□□□□ -0.27
Npc1O35604 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.34□□□□□ -0.27
Npc1O35604 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npc1O35604 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Npc1O35604 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Npc1O35604 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npc1O35604 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npc1O35604 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npc1O35604 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Npc1O35604 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Npc1O35604 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Npc1O35604 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Npc1O35604 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npc1O35604 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npc1O35604 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.33□□□□□ -0.28
Npc1O35604 Mir6392-201ENSMUST00000184924 108 ntBASIC13.33□□□□□ -0.28
Npc1O35604 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms