Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Gm14130-201ENSMUST00000118417 987 ntBASIC20.61■□□□□ 0.89
Polr1aO35134 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Polr1aO35134 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC20.61■□□□□ 0.89
Polr1aO35134 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Gm25043-201ENSMUST00000158604 212 ntBASIC20.61■□□□□ 0.89
Polr1aO35134 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Gm5597-201ENSMUST00000182353 1193 ntBASIC20.61■□□□□ 0.89
Polr1aO35134 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC20.61■□□□□ 0.89
Polr1aO35134 Gm18916-201ENSMUST00000198264 1246 ntBASIC20.61■□□□□ 0.89
Polr1aO35134 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Polr1aO35134 AC154595.3-201ENSMUST00000224579 384 ntBASIC20.61■□□□□ 0.89
Polr1aO35134 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr1aO35134 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Polr1aO35134 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Polr1aO35134 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Polr1aO35134 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Gm11531-201ENSMUST00000117614 555 ntBASIC20.6■□□□□ 0.89
Polr1aO35134 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC20.6■□□□□ 0.89
Polr1aO35134 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC20.6■□□□□ 0.89
Polr1aO35134 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Polr1aO35134 Gm5869-201ENSMUST00000200248 1257 ntBASIC20.6■□□□□ 0.89
Polr1aO35134 Gm18753-201ENSMUST00000201000 566 ntBASIC20.6■□□□□ 0.89
Polr1aO35134 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC20.6■□□□□ 0.89
Polr1aO35134 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC20.6■□□□□ 0.89
Polr1aO35134 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Polr1aO35134 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Polr1aO35134 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC20.59■□□□□ 0.89
Polr1aO35134 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Polr1aO35134 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC20.59■□□□□ 0.89
Polr1aO35134 Gm2260-201ENSMUST00000184965 657 ntBASIC20.59■□□□□ 0.89
Polr1aO35134 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC20.59■□□□□ 0.89
Polr1aO35134 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Polr1aO35134 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Polr1aO35134 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC20.59■□□□□ 0.89
Polr1aO35134 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Polr1aO35134 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Polr1aO35134 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Polr1aO35134 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC20.58■□□□□ 0.89
Polr1aO35134 Gm15276-201ENSMUST00000145953 498 ntBASIC20.58■□□□□ 0.89
Polr1aO35134 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Polr1aO35134 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC20.58■□□□□ 0.89
Polr1aO35134 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC20.58■□□□□ 0.89
Polr1aO35134 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC20.58■□□□□ 0.89
Polr1aO35134 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Polr1aO35134 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Polr1aO35134 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Polr1aO35134 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Polr1aO35134 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Polr1aO35134 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Polr1aO35134 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Gm37827-201ENSMUST00000194486 1542 ntBASIC20.58■□□□□ 0.88
Polr1aO35134 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Gm12176-201ENSMUST00000121420 875 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms