Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.17■□□□□ 0.02
B020004C17RikJ3QP07 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Gm18584-201ENSMUST00000203098 964 ntBASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
B020004C17RikJ3QP07 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Gm11964-201ENSMUST00000120982 444 ntBASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Gm26185-201ENSMUST00000157692 266 ntBASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
B020004C17RikJ3QP07 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Gm12363-201ENSMUST00000122250 668 ntBASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Gm17376-201ENSMUST00000166016 84 ntBASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Gm6082-201ENSMUST00000215204 454 ntBASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Morn2-202ENSMUST00000227729 656 ntBASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
B020004C17RikJ3QP07 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms