Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Gm13823-201ENSMUST00000119930 345 ntBASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 BC001981-202ENSMUST00000191393 1545 ntBASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shisa8J3QNX5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Gm29741-201ENSMUST00000192667 421 ntBASIC12.45□□□□□ -0.42
Shisa8J3QNX5 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shisa8J3QNX5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shisa8J3QNX5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms