Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.39■□□□□ 0.21
NpcdF8VQB8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.38■□□□□ 0.21
NpcdF8VQB8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Gm14263-201ENSMUST00000117955 746 ntBASIC16.38■□□□□ 0.21
NpcdF8VQB8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.38■□□□□ 0.21
NpcdF8VQB8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm24514-201ENSMUST00000174961 285 ntBASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm37489-201ENSMUST00000191883 159 ntBASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm37922-201ENSMUST00000195596 455 ntBASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.37■□□□□ 0.21
NpcdF8VQB8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NpcdF8VQB8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.36■□□□□ 0.21
NpcdF8VQB8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NpcdF8VQB8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.36■□□□□ 0.21
NpcdF8VQB8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NpcdF8VQB8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.36■□□□□ 0.21
NpcdF8VQB8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NpcdF8VQB8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms