Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Colca2F8VPY8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Gm14028-201ENSMUST00000117434 479 ntBASIC12.82□□□□□ -0.36
Colca2F8VPY8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.82□□□□□ -0.36
Colca2F8VPY8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Gm19208-201ENSMUST00000213861 912 ntBASIC12.82□□□□□ -0.36
Colca2F8VPY8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Colca2F8VPY8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.81□□□□□ -0.36
Colca2F8VPY8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Gm14263-201ENSMUST00000117955 746 ntBASIC12.81□□□□□ -0.36
Colca2F8VPY8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.81□□□□□ -0.36
Colca2F8VPY8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Gm15276-201ENSMUST00000145953 498 ntBASIC12.81□□□□□ -0.36
Colca2F8VPY8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.81□□□□□ -0.36
Colca2F8VPY8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Colca2F8VPY8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Colca2F8VPY8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Colca2F8VPY8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms