Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm3222-201ENSMUST00000071282 990 ntBASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Pcdh9F8VPK8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Gm13385-201ENSMUST00000121089 220 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Gm22175-201ENSMUST00000175007 78 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Gm27622-201ENSMUST00000183779 60 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdh9F8VPK8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Gm13616-201ENSMUST00000120600 222 ntBASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms