Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Gm27892-201ENSMUST00000185017 106 ntBASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Gm7287-201ENSMUST00000205267 602 ntBASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Gm5186-201ENSMUST00000218781 920 ntBASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb9E9Q5G2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb9E9Q5G2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Gm26315-201ENSMUST00000083890 321 ntBASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb9E9Q5G2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb9E9Q5G2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Mir1894-201ENSMUST00000122802 81 ntBASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms