Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hfm1D3Z4R1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hfm1D3Z4R1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Gm12502-201ENSMUST00000120197 444 ntBASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hfm1D3Z4R1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Gm11930-201ENSMUST00000117788 190 ntBASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Gm12201-201ENSMUST00000120657 1234 ntBASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Gm5597-201ENSMUST00000182353 1193 ntBASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Gm44772-201ENSMUST00000207623 1191 ntBASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Gm6458-201ENSMUST00000211573 635 ntBASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hfm1D3Z4R1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Gm13875-201ENSMUST00000120162 282 ntBASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Gm42997-202ENSMUST00000200321 985 ntBASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hfm1D3Z4R1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms