Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pramef20B1ARV6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pramef20B1ARV6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pramef20B1ARV6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pramef20B1ARV6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pramef20B1ARV6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Gm23984-201ENSMUST00000157139 203 ntBASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pramef20B1ARV6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gm43438-201ENSMUST00000198133 379 ntBASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gm6180-201ENSMUST00000065243 498 ntBASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 BC001981-202ENSMUST00000191393 1545 ntBASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pramef20B1ARV6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pramef20B1ARV6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms