Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfap99A0A140LIX9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Mir6420-201ENSMUST00000185032 102 ntBASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfap99A0A140LIX9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap99A0A140LIX9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap99A0A140LIX9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cfap99A0A140LIX9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Cfap99A0A140LIX9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap99A0A140LIX9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Cfap99A0A140LIX9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfap99A0A140LIX9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Gm12390-201ENSMUST00000117897 397 ntBASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Gm27839-201ENSMUST00000184242 106 ntBASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfap99A0A140LIX9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Gm44608-201ENSMUST00000206827 855 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms