Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm9385-201ENSMUST00000117563 472 ntBASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav6n-6A0A075B6B2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm14822-201ENSMUST00000122247 291 ntBASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm27702-201ENSMUST00000184512 56 ntBASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm18057-201ENSMUST00000208220 503 ntBASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm9182-201ENSMUST00000217829 639 ntBASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav6n-6A0A075B6B2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms