Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.05□□□□□ -0.16
Speer3W4VSP1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Speer3W4VSP1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Gm15968-201ENSMUST00000119342 1168 ntBASIC14.04□□□□□ -0.16
Speer3W4VSP1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Gm20553-201ENSMUST00000204205 844 ntBASIC14.04□□□□□ -0.16
Speer3W4VSP1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.04□□□□□ -0.16
Speer3W4VSP1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.04□□□□□ -0.16
Speer3W4VSP1 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.04□□□□□ -0.16
Speer3W4VSP1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Speer3W4VSP1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Gm27702-201ENSMUST00000184512 56 ntBASIC14.03□□□□□ -0.16
Speer3W4VSP1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.03□□□□□ -0.16
Speer3W4VSP1 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.03□□□□□ -0.16
Speer3W4VSP1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.03□□□□□ -0.16
Speer3W4VSP1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Speer3W4VSP1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Gm5403-201ENSMUST00000117105 2795 ntBASIC14.02□□□□□ -0.16
Speer3W4VSP1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Speer3W4VSP1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Speer3W4VSP1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms