Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm27989-201ENSMUST00000184721 107 ntBASIC13.71□□□□□ -0.21
H2afb2S4R1M3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.71□□□□□ -0.21
H2afb2S4R1M3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb2S4R1M3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Gm15920-201ENSMUST00000118998 402 ntBASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb2S4R1M3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb2S4R1M3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.68□□□□□ -0.22
H2afb2S4R1M3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms