Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.84□□□□□ -0.35
Cldn6Q9Z262 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn6Q9Z262 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cldn6Q9Z262 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cldn6Q9Z262 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Gm12151-201ENSMUST00000121374 290 ntBASIC12.83□□□□□ -0.36
Cldn6Q9Z262 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldn6Q9Z262 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Gm15240-201ENSMUST00000118156 720 ntBASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Gm15920-201ENSMUST00000118998 402 ntBASIC12.82□□□□□ -0.36
Cldn6Q9Z262 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cldn6Q9Z262 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms