Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Gm38671-201ENSMUST00000200573 130 ntBASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Gm6091-201ENSMUST00000098307 165 ntBASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn8aQ9WTU3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn8aQ9WTU3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm11425-201ENSMUST00000119608 498 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm27486-201ENSMUST00000184923 80 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Gm9396-201ENSMUST00000076703 567 ntBASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn8aQ9WTU3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms