Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf4Q9QZS2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Gm15173-201ENSMUST00000122049 433 ntBASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf4Q9QZS2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf4Q9QZS2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Gm5864-201ENSMUST00000202263 970 ntBASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf4Q9QZS2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms