Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1fQ9JIS7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1fQ9JIS7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gm17376-201ENSMUST00000166016 84 ntBASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gm20482-202ENSMUST00000174729 825 ntBASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1fQ9JIS7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Gm6082-201ENSMUST00000215204 454 ntBASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1fQ9JIS7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1fQ9JIS7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms