Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.62□□□□□ -0.23
Tubb3Q9ERD7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gm3436-201ENSMUST00000179930 840 ntBASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gm44855-201ENSMUST00000205725 362 ntBASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Mir125a-201ENSMUST00000083545 68 ntBASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Syt7-205ENSMUST00000224135 1557 ntBASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tubb3Q9ERD7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Tubb3Q9ERD7 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms