Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Gm43118-201ENSMUST00000199149 775 ntBASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Gm19309-201ENSMUST00000218295 205 ntBASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Gm5370-201ENSMUST00000187187 574 ntBASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf1Q9EPU4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Gm10339-203ENSMUST00000225409 1671 ntBASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Mir1247-201ENSMUST00000116706 82 ntBASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf1Q9EPU4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpsf1Q9EPU4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cpsf1Q9EPU4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpsf1Q9EPU4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpsf1Q9EPU4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf1Q9EPU4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Gm11637-201ENSMUST00000120601 592 ntBASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Gm10146-201ENSMUST00000072739 309 ntBASIC18.63■□□□□ 0.57
Cpsf1Q9EPU4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms