Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Gm5687-201ENSMUST00000118252 640 ntBASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Gm38144-201ENSMUST00000192790 465 ntBASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Rrp8Q9DB85 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Gm17330-201ENSMUST00000221047 165 ntBASIC13.36□□□□□ -0.27
Rrp8Q9DB85 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rrp8Q9DB85 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.35□□□□□ -0.27
Rrp8Q9DB85 Gm8584-201ENSMUST00000171982 758 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms