Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rsph3bQ9DA80 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rsph3bQ9DA80 Gm12928-201ENSMUST00000117115 573 ntBASIC15.02■□□□□ -0
Rsph3bQ9DA80 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.02■□□□□ -0
Rsph3bQ9DA80 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.02■□□□□ -0
Rsph3bQ9DA80 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.02■□□□□ -0
Rsph3bQ9DA80 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rsph3bQ9DA80 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rsph3bQ9DA80 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rsph3bQ9DA80 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rsph3bQ9DA80 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rsph3bQ9DA80 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Rsph3bQ9DA80 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rsph3bQ9DA80 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rsph3bQ9DA80 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm15371-201ENSMUST00000117057 784 ntBASIC15□□□□□ -0.01
Rsph3bQ9DA80 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm11425-201ENSMUST00000119608 498 ntBASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm12134-201ENSMUST00000122109 520 ntBASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm16342-201ENSMUST00000124025 1025 ntBASIC15□□□□□ -0.01
Rsph3bQ9DA80 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm27486-201ENSMUST00000184923 80 ntBASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm8463-201ENSMUST00000208573 613 ntBASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm9396-201ENSMUST00000076703 567 ntBASIC15□□□□□ -0.01
Rsph3bQ9DA80 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rsph3bQ9DA80 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms