Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Mir8102-201ENSMUST00000184148 139 ntBASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4bQ9D8B3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Gm15770-201ENSMUST00000117498 584 ntBASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Gm27989-201ENSMUST00000184721 107 ntBASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4bQ9D8B3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chmp4bQ9D8B3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms