Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.86□□□□□ -0.35
Chaf1bQ9D0N7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gm14140-201ENSMUST00000119999 995 ntBASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chaf1bQ9D0N7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chaf1bQ9D0N7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chaf1bQ9D0N7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chaf1bQ9D0N7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Chaf1bQ9D0N7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms