Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Gm29667-201ENSMUST00000190817 490 ntBASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sft2d3Q9CSV6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.71□□□□□ -0.54
Sft2d3Q9CSV6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Gm15321-201ENSMUST00000121290 288 ntBASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Gm33320-201ENSMUST00000192232 530 ntBASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Gm6916-202ENSMUST00000205523 195 ntBASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sft2d3Q9CSV6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.69□□□□□ -0.54
Sft2d3Q9CSV6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms