Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lrrc40Q9CRC8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Gm13616-201ENSMUST00000120600 222 ntBASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Gm18041-201ENSMUST00000218210 618 ntBASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lrrc40Q9CRC8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Lrrc40Q9CRC8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Lrrc40Q9CRC8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms