Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm7Q9CQQ8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm7Q9CQQ8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm7Q9CQQ8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm7Q9CQQ8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm7Q9CQQ8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.82□□□□□ -0.2
Lsm7Q9CQQ8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm7Q9CQQ8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Gm12928-201ENSMUST00000117115 573 ntBASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Gm6244-201ENSMUST00000178732 841 ntBASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lsm7Q9CQQ8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm13689-201ENSMUST00000119360 685 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm2495-201ENSMUST00000191160 466 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm44397-201ENSMUST00000195950 113 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm5035-201ENSMUST00000215581 927 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm24447-201ENSMUST00000083977 338 ntBASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm7Q9CQQ8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Gm27486-201ENSMUST00000184923 80 ntBASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm7Q9CQQ8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms