Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTRAFQ9CQE8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTRAFQ9CQE8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gm5682-201ENSMUST00000173402 505 ntBASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gm37230-201ENSMUST00000194491 818 ntBASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RTRAFQ9CQE8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms