Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.2□□□□□ -0.14
Q9CQC3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Q9CQC3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.2□□□□□ -0.14
Q9CQC3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.2□□□□□ -0.14
Q9CQC3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.2□□□□□ -0.14
Q9CQC3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Q9CQC3 Gm43094-201ENSMUST00000196549 921 ntBASIC14.2□□□□□ -0.14
Q9CQC3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Q9CQC3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.2□□□□□ -0.14
Q9CQC3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q9CQC3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Q9CQC3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Q9CQC3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.19□□□□□ -0.14
Q9CQC3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Q9CQC3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Q9CQC3 Gm28760-201ENSMUST00000185995 736 ntBASIC14.19□□□□□ -0.14
Q9CQC3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.19□□□□□ -0.14
Q9CQC3 Gm17330-201ENSMUST00000221047 165 ntBASIC14.19□□□□□ -0.14
Q9CQC3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.19□□□□□ -0.14
Q9CQC3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.19□□□□□ -0.14
Q9CQC3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Gm5161-201ENSMUST00000075243 853 ntBASIC14.19□□□□□ -0.14
Q9CQC3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Q9CQC3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q9CQC3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Q9CQC3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.18□□□□□ -0.14
Q9CQC3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Q9CQC3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.18□□□□□ -0.14
Q9CQC3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.18□□□□□ -0.14
Q9CQC3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Q9CQC3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.18□□□□□ -0.14
Q9CQC3 Gm14057-201ENSMUST00000120631 482 ntBASIC14.18□□□□□ -0.14
Q9CQC3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.18□□□□□ -0.14
Q9CQC3 Auts2-212ENSMUST00000178555 309 ntBASIC14.18□□□□□ -0.14
Q9CQC3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.18□□□□□ -0.14
Q9CQC3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Gm42612-201ENSMUST00000197986 623 ntBASIC14.18□□□□□ -0.14
Q9CQC3 Gm43170-201ENSMUST00000199827 612 ntBASIC14.18□□□□□ -0.14
Q9CQC3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.18□□□□□ -0.14
Q9CQC3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.18□□□□□ -0.14
Q9CQC3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Q9CQC3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q9CQC3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q9CQC3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms