Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Krt88Q9CPR6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.34□□□□□ -0.43
Krt88Q9CPR6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 AA543401-201ENSMUST00000164248 1269 ntBASIC12.34□□□□□ -0.43
Krt88Q9CPR6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Krt88Q9CPR6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Gm6973-201ENSMUST00000117080 721 ntBASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Gm18737-201ENSMUST00000173594 937 ntBASIC12.33□□□□□ -0.44
Krt88Q9CPR6 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt88Q9CPR6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt88Q9CPR6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms