Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim11Q99PQ2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Gm13453-201ENSMUST00000118708 357 ntBASIC15.61■□□□□ 0.09
Trim11Q99PQ2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.61■□□□□ 0.09
Trim11Q99PQ2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Gm24420-201ENSMUST00000176676 59 ntBASIC15.6■□□□□ 0.09
Trim11Q99PQ2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim11Q99PQ2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.59■□□□□ 0.09
Trim11Q99PQ2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim11Q99PQ2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms