Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Gm13045-201ENSMUST00000119019 712 ntBASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh15Q99PJ1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm17040-202ENSMUST00000170597 889 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm37666-201ENSMUST00000194110 866 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm38092-201ENSMUST00000195600 653 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm5904-201ENSMUST00000210286 865 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh15Q99PJ1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Gm19459-201ENSMUST00000176240 835 ntBASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Rprl1-202ENSMUST00000198476 238 ntBASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh15Q99PJ1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm13492-201ENSMUST00000119772 665 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm6963-201ENSMUST00000147879 379 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm8194-201ENSMUST00000159783 859 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh15Q99PJ1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms