Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Gtf2ird2Q99NI3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf2ird2Q99NI3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf2ird2Q99NI3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf2ird2Q99NI3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gtf2ird2Q99NI3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gtf2ird2Q99NI3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gtf2ird2Q99NI3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Gm11524-201ENSMUST00000119349 807 ntBASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf2ird2Q99NI3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Mir7654-201ENSMUST00000185082 70 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gm44719-201ENSMUST00000206404 149 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gm18307-201ENSMUST00000206864 949 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gtf2ird2Q99NI3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf2ird2Q99NI3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf2ird2Q99NI3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf2ird2Q99NI3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gtf2ird2Q99NI3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms